A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

A

accept(File) - Method in class fsmvis.gui.ExampleFileFilter
Return true if this file should be shown in the directory pane, false if it shouldn't.
actionPerformed(ActionEvent) - Method in class fsmvis.gui.FileHandlerFrame
Required by an ActionListener, is called whenever a button is pressed
actionPerformed(ActionEvent) - Method in class fsmvis.gui.ProgressBarFrame
 
actionPerformed(ActionEvent) - Method in class fsmvis.gui.ScatterControlPanel
called whenever an action is performed, required by ActionListener
actionPerformed(ActionEvent) - Method in class fsmvis.gui.MenuPanel
Required by an ActionListener, is called whenever a button is pressed
actionPerformed(ActionEvent) - Method in class fsmvis.gui.SelectionControlPanel
called whenever one of the buttons on the screen is called
actionPerformed(ActionEvent) - Method in class fsmvis.gui.SelectAlgorithmFrame
 
actionPerformed(ActionEvent) - Method in class fsmvis.gui.SearchBoxPanel
called whenever an action is performed
activeDimensions - Static variable in class fsmvis.engine.Coordinate
 
actualItsToStop - Variable in class fsmvis.engine.EndCriteria
 
add(Vect) - Method in class fsmvis.engine.Coordinate
Adds the components of the vector v onto this coordinate
addAdjustmentListener(DoubleSliderAdjustmentListener) - Method in class fsmvis.gui.DoubleSlider
Add a DoubleSliderAdjustmentListener to listen for adjustment events
addExtension(String) - Method in class fsmvis.gui.ExampleFileFilter
Adds a filetype "dot" extension to filter against.
addForces(int, int) - Method in class fsmvis.engine.SpringModel
Calculates the force that will be acting between obj1 and obj2 This is based on the difference between their actual distance and their high dimensional distance.
addItem(DataItem) - Method in class fsmvis.data.DataItemCollection
adds a DataItem to this collection of dataItems
addSelectableObject(Selectable) - Method in class fsmvis.gui.SelectionHandler
 
addSelectionChangedListener(SelectionChangedListener) - Method in class fsmvis.gui.SelectionHandler
Adds a selection changed listener
addToSelected(List) - Method in class fsmvis.gui.SelectionHandler
Adds all of the indices in the newSelect array to the current selection
addToSelection(Rectangle) - Method in class fsmvis.gui.ScatterPanel
Adds all the data items which are within the on screen rectangle rect to the currently selected indices that this object holds
adjustmentValueChanged(DoubleSlider) - Method in class fsmvis.gui.DoubleSliderPanel
Called whenever a double ended slider is dragged
adjustmentValueChanged(DoubleSlider) - Method in interface fsmvis.gui.DoubleSliderAdjustmentListener
The given DoubleSlider's value has changed
all - Variable in class fsmvis.gui.SelectionHandler
 
all - Variable in class fsmvis.gui.SelectionControlPanel
 
all - Variable in class fsmvis.gui.SelectAlgorithmFrame
 
allIndices - Variable in class fsmvis.gui.DoubleSliderPanel
 
allIndices - Variable in class fsmvis.gui.SelectionControlPanel
 
animate - Variable in class fsmvis.gui.MenuPanel
 
animating - Variable in class fsmvis.gui.ScatterPanel
 
any - Variable in class fsmvis.gui.SelectAlgorithmFrame
 
average - Variable in class fsmvis.data.DataItemCollection
 
average - Static variable in class fsmvis.data.DataItem
 
average() - Static method in class fsmvis.data.DataItem
 

B

back - Variable in class fsmvis.gui.SelectAlgorithmFrame
 
BACKGROUND - Static variable in class fsmvis.gui.ScatterPanel
 
binContentsCache - Variable in class fsmvis.gui.MiniHistogram
 
bins - Variable in class fsmvis.gui.MiniHistogram
 
binSize - Variable in class fsmvis.gui.MiniHistogram
 
binSizeDate - Variable in class fsmvis.gui.MiniHistogram
 
binSizeDbl - Variable in class fsmvis.gui.MiniHistogram
 
binSizeInt - Variable in class fsmvis.gui.MiniHistogram
 
binStates - Variable in class fsmvis.gui.MiniHistogram
 
bold14 - Static variable in class fsmvis.gui.Viewer
 
browse - Variable in class fsmvis.gui.FileHandlerFrame
 
bStable - Variable in class fsmvis.data.CSVOut
 
BTC - class fsmvis.ColorScales.BTC.
 
BTC() - Constructor for class fsmvis.ColorScales.BTC
 
BTY - class fsmvis.ColorScales.BTY.
 
BTY() - Constructor for class fsmvis.ColorScales.BTY
 

C

calcDesiredDistances() - Method in class fsmvis.data.DataItemCollection
Calculates the desired distances array by using a similarity metric on every object with every other object.
calcForces(int) - Method in class fsmvis.engine.SpringModel
Calculates the forces that will be exerted on dataItem with index index Calcs forces by comparing every object with every other object with indices < index.
calcForces(int) - Method in class fsmvis.engine.NeighbourAndSampleModel
Calculates the forces that will be exerted on dataItem with index index Calcs forces only by looking at neighbours and samples lists.
calcGravityForce(int) - Method in class fsmvis.engine.SpringModel
Method to simulate gravity acting on the system, does this by dividing the z component of the force
calcNormValues() - Method in class fsmvis.data.DataItemCollection
Calculates approximations of sigma and mean needed to normalise distance data by taking a sample of distances from the full data set
calcNormValues(ArrayList) - Method in class fsmvis.data.DataItemCollection
Calculates approximations of sigma and mean needed to normalise distance data by taking a sample of distances from the subset
calcPosX(double) - Method in class fsmvis.gui.ScatterPanel
calculates the x position that this object should be at within the current JPanel and layoutbounds of the layoutModel
calcPosY(double) - Method in class fsmvis.gui.ScatterPanel
calculates the y position that this object should be at within the current JPanel and layoutbounds of the layoutModel
calcTimeForce(int) - Method in class fsmvis.engine.SpringModel
Method to apply a similar effect on the fourth dimension, which I have called time, to flatten everything out to 2D
cancel - Variable in class fsmvis.gui.FileHandlerFrame
 
cancel - Variable in class fsmvis.gui.SelectAlgorithmFrame
 
checkBoxes - Variable in class fsmvis.gui.CheckBoxPanel
 
CheckBoxPanel - class fsmvis.gui.CheckBoxPanel.
 
CheckBoxPanel(Viewer, Set, DataItemCollection, int) - Constructor for class fsmvis.gui.CheckBoxPanel
constructor:
checkBs - Variable in class fsmvis.gui.SelectionControlPanel
 
chooser - Variable in class fsmvis.gui.FileHandlerFrame
 
col - Variable in class fsmvis.gui.SearchBoxPanel
 
colName - Variable in class fsmvis.gui.CheckBoxPanel
 
colName - Variable in class fsmvis.gui.DoubleSliderPanel
 
colName - Variable in class fsmvis.gui.SearchBoxPanel
 
color - Variable in class fsmvis.data.DataItem
 
colorField - Variable in class fsmvis.gui.ScatterPanel
 
ColorScales - class fsmvis.ColorScales.ColorScales.
Class managing a set of colour scales.
ColorScales() - Constructor for class fsmvis.ColorScales.ColorScales
 
colorScheme - Variable in class fsmvis.gui.ScatterPanel
 
colours - Variable in class fsmvis.gui.MenuPanel
 
column - Variable in class fsmvis.gui.CheckBoxPanel
 
column - Variable in class fsmvis.gui.DoubleSliderPanel
 
column - Variable in class fsmvis.gui.SearchBoxPanel
 
columns - Variable in class fsmvis.data.DataItemCollection
 
compare(Object, Object) - Method in class fsmvis.gui.IndicesComparator
Compares its two arguments for order.
compare(Object, Object) - Method in class fsmvis.engine.NeighbourComparator
Compares its two arguments for order.
con - Variable in class fsmvis.gui.SelectAlgorithmFrame
 
confirmDialog(Component, String) - Static method in class fsmvis.gui.DialogBox
Asks the user to confirm the message msg and offers them yes or no options.
conIts - Variable in class fsmvis.engine.EndCriteria
 
contents - Variable in class fsmvis.gui.MenuPanel
 
Coordinate - class fsmvis.engine.Coordinate.
 
Coordinate() - Constructor for class fsmvis.engine.Coordinate
constructor: Takes no params and sets the initial values to be 0.0
Coordinate(Coordinate) - Constructor for class fsmvis.engine.Coordinate
constructor: instantiate the coordinate with a new copy of an existing coordinate
Coordinate(double, double) - Constructor for class fsmvis.engine.Coordinate
constructor: takes two double values to represent the coords
Coordinate(double, double, double) - Constructor for class fsmvis.engine.Coordinate
constructor: takes two double values to represent the coords
Coordinate(double, double, double, double) - Constructor for class fsmvis.engine.Coordinate
constructor: takes two double values to represent the coords
createRandomSample(HashSet, HashSet, int, int) - Static method in class fsmvis.utils.Utils
Creates a random List of integers, all different, with maximum value max and with size elements, with no elements from exclude, and only elements from include.
criteria - Variable in class fsmvis.engine.EndCriteria
 
CSV_TYPES - Static variable in class fsmvis.data.CSVLoader
 
csvFile - Variable in class fsmvis.data.CSVLoader
 
CSVLoader - class fsmvis.data.CSVLoader.
 
CSVLoader(Viewer, String) - Constructor for class fsmvis.data.CSVLoader
Constructor for CSVLoader, takes a csv filename as param
CSVOut - class fsmvis.data.CSVOut.
 
CSVOut() - Constructor for class fsmvis.data.CSVOut
 

D

damping - Variable in class fsmvis.gui.EngineControlPanel
 
DAMPING_FACTOR - Static variable in interface fsmvis.engine.LayoutModel
 
dampingFactor - Static variable in class fsmvis.engine.SpringModel
 
data - Variable in class fsmvis.gui.MiniHistogram
 
DATA_DOT_SIZE - Static variable in class fsmvis.gui.ScatterPanel
 
DataFileLoaderFrame - class fsmvis.gui.DataFileLoaderFrame.
 
DataItem - class fsmvis.data.DataItem.
 
DataItem(Object[]) - Constructor for class fsmvis.data.DataItem
constructor: takes an array of values
dataItemColl - Variable in class fsmvis.data.CSVLoader
 
DataItemCollection - class fsmvis.data.DataItemCollection.
 
DataItemCollection() - Constructor for class fsmvis.data.DataItemCollection
Constructor
dataItems - Variable in class fsmvis.gui.CheckBoxPanel
 
dataItems - Variable in class fsmvis.gui.DoubleSliderPanel
 
dataItems - Variable in class fsmvis.gui.SelectAlgorithmFrame
 
dataItems - Variable in class fsmvis.gui.SearchBoxPanel
 
dataItems - Variable in class fsmvis.engine.SpringModel
 
dataItems - Variable in class fsmvis.data.DataItemCollection
 
DataLoader - interface fsmvis.data.DataLoader.
 
dataSize - Variable in class fsmvis.gui.ScatterPanel
 
dataSize - Variable in class fsmvis.gui.InfoPanel
 
dataSizeFactor - Variable in class fsmvis.engine.SpringModel
 
DATE - Static variable in class fsmvis.data.DataItemCollection
 
DATE_FORMAT - Static variable in class fsmvis.data.CSVLoader
 
DATE_NAME - Static variable in class fsmvis.data.CSVLoader
 
dateF - Variable in class fsmvis.data.CSVLoader
 
DEFAULT_COLOR - Static variable in class fsmvis.data.DataItem
 
DEFAULT_DATE - Static variable in class fsmvis.data.CSVLoader
 
DEFAULT_DATE_FORMAT - Static variable in class fsmvis.data.CSVLoader
 
DEFAULT_DELIMITER - Static variable in class fsmvis.data.CSVLoader
 
DEFAULT_DOUBLE - Static variable in class fsmvis.data.CSVLoader
 
DEFAULT_EXT - Variable in class fsmvis.utils.PropertiesHandler
 
DEFAULT_INTEGER - Static variable in class fsmvis.data.CSVLoader
 
DEFAULT_STRING - Static variable in class fsmvis.data.CSVLoader
 
DEFAULT_UNDEFINED - Static variable in class fsmvis.data.CSVLoader
 
delay - Variable in class fsmvis.gui.ScatterPanel
 
delay - Variable in class fsmvis.gui.InfoPanel
 
delim - Variable in class fsmvis.data.CSVLoader
 
DELIMITER_FORMAT - Static variable in class fsmvis.data.CSVLoader
 
DELTA_TIME - Static variable in interface fsmvis.engine.LayoutModel
 
deltaTime - Static variable in class fsmvis.engine.SpringModel
 
DES_TRAIL_COL - Static variable in class fsmvis.gui.ScatterPanel
 
deSelect - Variable in class fsmvis.gui.SearchBoxPanel
 
deselected - Variable in class fsmvis.gui.DoubleSliderPanel
 
DESELECTED_DOT - Static variable in class fsmvis.gui.ScatterPanel
 
desiredDist - Variable in class fsmvis.data.DataItemCollection
 
DialogBox - class fsmvis.gui.DialogBox.
 
DialogBox() - Constructor for class fsmvis.gui.DialogBox
 
disable() - Method in class fsmvis.gui.ScatterControlPanel
 
disable() - Method in class fsmvis.gui.MenuPanel
Disables the menu panel and turns off a lot of features
disable() - Method in class fsmvis.gui.InfoPanel
Disables this window, stops it updating
display - Variable in class fsmvis.gui.MenuPanel
 
doIteration() - Method in class fsmvis.engine.SpringModel
Method to perform one iteration of the layout algorithm for this layout model
doIteration() - Method in interface fsmvis.engine.LayoutModel
Method to perform one iteration of the layout algorithm for this layout model
doneWork() - Method in interface fsmvis.utils.MonitorableTask
A method that is called when ever an item of work has been completed
doneWork() - Method in class fsmvis.data.CSVLoader
A method that is called when ever an item of work has been completed
doneWork(int) - Method in interface fsmvis.utils.MonitorableTask
A method that is called when ever a number of work items have been completed
doneWork(int) - Method in class fsmvis.data.CSVLoader
A method that is called when ever a number of work items have been completed
doNorm - Variable in class fsmvis.gui.SelectAlgorithmFrame
 
doNormalise() - Method in class fsmvis.engine.SpringModel
Instruction to normalise data for spring model
doNormalise() - Method in class fsmvis.engine.NeighbourAndSampleModel
Instruction to normalise data for spring model
doNotNorm - Variable in class fsmvis.gui.SelectAlgorithmFrame
 
dotProduct(Vect) - Method in class fsmvis.engine.Vect
calculates the dot product between this vector and the vector passed as an arg
DOUBLE - Static variable in class fsmvis.data.DataItemCollection
 
DOUBLE_NAME - Static variable in class fsmvis.data.CSVLoader
 
DoubleSlider - class fsmvis.gui.DoubleSlider.
Basic double-ended slider for Swing.
DoubleSlider() - Constructor for class fsmvis.gui.DoubleSlider
Construct a default DoubleSlider with minimum 0.0 and maximum 100.0, oriented HORIZONTALly
DoubleSlider(int, double, double) - Constructor for class fsmvis.gui.DoubleSlider
Construct a DoubleSlider with given minimum, maximum and orientation
DoubleSliderAdjustmentListener - interface fsmvis.gui.DoubleSliderAdjustmentListener.
Interface for adjustment listeners for DoubleSlider
DoubleSliderPanel - class fsmvis.gui.DoubleSliderPanel.
 
DoubleSliderPanel(Viewer, DataItemCollection, int) - Constructor for class fsmvis.gui.DoubleSliderPanel
 
down - Variable in class fsmvis.gui.MouseHandler
 
drawDot(Graphics, int, Color) - Method in class fsmvis.gui.ScatterPanel
Draws a dot located at index index in the data item collection, with the color col.
drawTrail(Graphics, int, Color) - Method in class fsmvis.gui.ScatterPanel
Draws a trail on the data item with index index.
drawTrails - Variable in class fsmvis.gui.ScatterPanel
 
drawTrails - Variable in class fsmvis.gui.MenuPanel
 

E

editAllEndC() - Method in class fsmvis.gui.SelectAlgorithmFrame
 
enable() - Method in class fsmvis.gui.ScatterControlPanel
 
enable() - Method in class fsmvis.gui.MenuPanel
Enables this menu panel
enable() - Method in class fsmvis.gui.InfoPanel
Enables this window, makes it active
end() - Method in class fsmvis.gui.Viewer
 
endC - Variable in class fsmvis.engine.SpringModel
 
EndCriteria - class fsmvis.engine.EndCriteria.
 
EndCriteria(int, int, double, int, int) - Constructor for class fsmvis.engine.EndCriteria
 
endGroup - Variable in class fsmvis.gui.SelectAlgorithmFrame
 
engControl - Variable in class fsmvis.gui.Viewer
 
EngineControlPanel - class fsmvis.gui.EngineControlPanel.
 
EngineControlPanel(Viewer) - Constructor for class fsmvis.gui.EngineControlPanel
 
equals(Coordinate) - Method in class fsmvis.engine.Coordinate
Defines whether or not two coordinates are equal
equals(Object) - Method in class fsmvis.gui.IndicesComparator
Define whether or not this class is equivalent to some other object, never used in this implementation
equals(Object) - Method in class fsmvis.engine.NeighbourComparator
Define whether or not this class is equivalent to some other object, never used in this implementation
error - Variable in class fsmvis.gui.InfoPanel
 
errorMessage(Component, String) - Static method in class fsmvis.gui.DialogBox
Send a standard Swing error message to the user informing them that msg error has occured
ExampleFileFilter - class fsmvis.gui.ExampleFileFilter.
A convenience implementation of FileFilter that filters out all files except for those type extensions that it knows about.
ExampleFileFilter() - Constructor for class fsmvis.gui.ExampleFileFilter
Creates a file filter.
ExampleFileFilter(String) - Constructor for class fsmvis.gui.ExampleFileFilter
Creates a file filter that accepts files with the given extension.
ExampleFileFilter(String[]) - Constructor for class fsmvis.gui.ExampleFileFilter
Creates a file filter from the given string array.
ExampleFileFilter(String[], String) - Constructor for class fsmvis.gui.ExampleFileFilter
Creates a file filter from the given string array and description.
ExampleFileFilter(String, String) - Constructor for class fsmvis.gui.ExampleFileFilter
Creates a file filter that accepts the given file type.
ExitingWindowHandler - class fsmvis.gui.ExitingWindowHandler.
 
ExitingWindowHandler(JFrame) - Constructor for class fsmvis.gui.ExitingWindowHandler
 
export - Variable in class fsmvis.gui.MenuPanel
 

F

fields - Variable in class fsmvis.data.CSVLoader
 
fields - Variable in class fsmvis.data.DataItemCollection
 
file - Variable in class fsmvis.gui.MenuPanel
 
FileHandlerFrame - class fsmvis.gui.FileHandlerFrame.
 
FileHandlerFrame(Viewer) - Constructor for class fsmvis.gui.FileHandlerFrame
constructor: Takes the parent of this object as a parameter, uses this to pass the results of the loading back, if required
fileName - Variable in class fsmvis.data.CSVLoader
 
fileText - Variable in class fsmvis.gui.FileHandlerFrame
 
fillBins() - Method in class fsmvis.gui.MiniHistogram
Called whenever the number of bins changes, or to init at start.
filter - Variable in class fsmvis.gui.FileHandlerFrame
 
findNewNeighbours(int) - Method in class fsmvis.engine.NeighbourAndSampleModel
For the object at index point, check thro' its samples list to check if any of those objects would make better neighbours than the ones currently in the neighbours list.
force - Variable in class fsmvis.engine.SpringModel
 
force - Variable in class fsmvis.data.DataItem
 
freeness - Variable in class fsmvis.gui.EngineControlPanel
 
freeness - Static variable in class fsmvis.engine.SpringModel
 
FREENESS - Static variable in interface fsmvis.engine.LayoutModel
 
fsmvis - package fsmvis
 
fsmvis.ColorScales - package fsmvis.ColorScales
 
fsmvis.data - package fsmvis.data
 
fsmvis.engine - package fsmvis.engine
 
fsmvis.gui - package fsmvis.gui
 
fsmvis.utils - package fsmvis.utils
 

G

get(int) - Method in class fsmvis.engine.Coordinate
 
getAbsoluteMaximum() - Method in class fsmvis.gui.DoubleSlider
Get the current absolute maximum value
getAbsoluteMinimum() - Method in class fsmvis.gui.DoubleSlider
Get the current absolute minimum value
getActiveDimensions() - Static method in class fsmvis.engine.Coordinate
A static method to get the number of dimensions which are currently active or in use
getApproxError() - Method in class fsmvis.engine.SpringModel
Calculates the approximate error in this layout, does this by calcing the value for a subset of the data set to get an approximation of the error without slowing down the layout too much.
getApproxError() - Method in interface fsmvis.engine.LayoutModel
Calculates the approximate error in this layout, does this by calcing the value for a subset of the data set to get an approximation of the error without slowing down the layout too much.
getApproxVelocity() - Method in class fsmvis.engine.SpringModel
Returns an approximation of the average error in the data set
getApproxVelocity() - Method in interface fsmvis.engine.LayoutModel
Returns an approximation of the average velocity in the data set
getAverageError() - Method in class fsmvis.data.DataItemCollection
Returns the average error in the system, this is the average distance that a dataItem is from its desired distance
getAvgError() - Method in class fsmvis.engine.SpringModel
Returns the average error in the data set
getAvgError() - Method in interface fsmvis.engine.LayoutModel
Returns the average error in the data set
getAvgVelocity() - Method in class fsmvis.engine.SpringModel
Returns the average velocity in the data set
getAvgVelocity() - Method in interface fsmvis.engine.LayoutModel
Returns the average velocity in the data set
getAvgVelocity() - Method in class fsmvis.data.DataItemCollection
Returns the average velocity of dataItems in the collection
getCenroidType() - Static method in class fsmvis.gui.KMeansSettingsFrame
 
getColor() - Method in class fsmvis.data.DataItem
Returns the color of this data item
getColSortedIndex(ArrayList, int) - Method in class fsmvis.gui.DoubleSliderPanel
Returns the value stored at the sorted index position i.
getColumn(int) - Method in class fsmvis.data.DataItemCollection
Returns the data from a specified "column".
getCrit() - Method in class fsmvis.engine.EndCriteria
 
getCurrentTime() - Method in class fsmvis.gui.InfoPanel
get the current elapsed time in seconds
getDataItem(int) - Method in class fsmvis.engine.SpringModel
Returns the data item at index index.
getDataItem(int) - Method in interface fsmvis.engine.LayoutModel
Returns the data item at index index.
getDataItem(int) - Method in class fsmvis.data.DataItemCollection
Returns the data item stored at location with index int index
getDataItemCollection() - Method in class fsmvis.engine.SpringModel
Returns the dataItemCollection object that this layoutmodel is representing.
getDataItemCollection() - Method in interface fsmvis.engine.LayoutModel
Returns the dataItemCollection object that this layoutmodel is representing.
getDataItemCollection() - Method in class fsmvis.data.CSVLoader
Returns a DataItemCollection object containing the data in the csv file
getDataItemCollection() - Method in interface fsmvis.data.DataLoader
Returns a DataItemCollection object containing the data in the input source
getDataItems() - Method in class fsmvis.data.DataItemCollection
Accessor method for the main collection held within this class
getDelay() - Method in class fsmvis.gui.ScatterPanel
Returns the current delay between iterations
getDescription() - Method in class fsmvis.gui.ExampleFileFilter
Returns the human readable description of this filter.
getDeselection() - Method in class fsmvis.gui.CheckBoxPanel
Returns the indices of the deselected items in this object This method may return null if the getSelection method is being used instead.
getDeselection() - Method in class fsmvis.gui.ScatterPanel
Returns the indices of the deselected items in this object This method may return null if the getSelection method is being used instead.
getDeselection() - Method in interface fsmvis.gui.Selectable
Returns the indices of the deselected items in this object This method may return null if the getSelection method is being used instead.
getDeselection() - Method in class fsmvis.gui.DoubleSliderPanel
Returns the indices of the deselected items in this object This method may return null if the getSelection method is being used instead.
getDeselection() - Method in class fsmvis.gui.SearchBoxPanel
Returns the indices of the deselected items in this object This method may return null if the getSelection method is being used instead.
getDesiredDist(int, int) - Method in class fsmvis.data.DataItemCollection
Returns the desired distance between these two objects.
getDesiredDist(int, int, String) - Method in class fsmvis.data.DataItemCollection
Returns the desired distance between these two objects.
getDisplayableItems() - Method in class fsmvis.engine.SpringModel
Returns the indices of the items which are displayable.
getDisplayableItems() - Method in interface fsmvis.engine.LayoutModel
Returns the indices of the items which are displayable.
getDistanceTo(DataItem, boolean) - Method in class fsmvis.data.DataItem
Calculates the distance metric to another data item
getDotColor(int) - Method in class fsmvis.gui.ScatterPanel
Returns the dot with index current drawing color, gets this from the ColorScales class by looking up this dots colour relative to the current colorScheme and colorField.
getExactTime() - Method in class fsmvis.gui.InfoPanel
get the current elapsed time
getExecutionTime() - Method in class fsmvis.engine.SpringModel
Returns the number of milliseconds that the algorithm has been running for.
getExecutionTime() - Method in interface fsmvis.engine.LayoutModel
Returns the number of milliseconds that the algorithm has been running for.
getExtension(File) - Method in class fsmvis.gui.ExampleFileFilter
Return the extension portion of the file's name .
getFields() - Method in class fsmvis.data.CSVLoader
gets the field names in the csv file
getFields() - Method in class fsmvis.data.DataItemCollection
Returns the names of the fields that this collection contains
getFields() - Method in interface fsmvis.data.DataLoader
gets the field names in the data source
getForce() - Method in class fsmvis.data.DataItem
Returns the vector force object associated with this object
getHilitedMaximum() - Method in class fsmvis.gui.DoubleSlider
Get the current hilited maximum value
getHilitedMinimum() - Method in class fsmvis.gui.DoubleSlider
Get the current hilited minimum value
getHiliteVisible() - Method in class fsmvis.gui.DoubleSlider
Determine whether or not the hilited range is currently marked
getInfoPanel() - Method in class fsmvis.gui.Viewer
Accessor method for the info panel
getInstance(Viewer) - Static method in class fsmvis.gui.LayoutFileSaverFrame
Static public accessor for this singleton frame
getInstance(Viewer) - Static method in class fsmvis.gui.DataFileLoaderFrame
Static public accessor for this singleton frame
getInstance(Viewer) - Static method in class fsmvis.gui.LayoutFileLoaderFrame
Static public accessor for this singleton frame
getInstance(Viewer) - Static method in class fsmvis.gui.LayoutFileExporterFrame
Static public accessor for this singleton frame
getInstance(Viewer) - Static method in class fsmvis.gui.KMeansSettingsFrame
Called whenever a component wants a view of the k_means settings, this ensures that it is singleton
getIterations() - Method in class fsmvis.gui.ScatterControlPanel
called whenever the state of an item is changed, required by ItemStateListener
getIterations() - Method in class fsmvis.gui.Viewer
 
getIterations() - Method in class fsmvis.gui.KMeansSettingsFrame
 
getLength() - Method in class fsmvis.engine.Vect
Returns the length of this vector, makes use of the Coordinate class to see how many dimensions are currently being used, then only uses these dimensions to calc the length
getLengthOfTask() - Method in interface fsmvis.utils.MonitorableTask
Returns the length of this current task, this is defined to be some kind of abstract work unit.
getLengthOfTask() - Method in class fsmvis.data.CSVLoader
Returns the length of this current task, this is defined to be some kind of abstract work unit.
getMaximum(int) - Method in class fsmvis.data.DataItemCollection
Returns the maximum value for a particular column, this will either be of type Integer, Double or Date.
getMaximums() - Method in class fsmvis.data.DataItemCollection
Returns the arraylist of the maximum values for each column in the data set.
getMaxIterations() - Method in class fsmvis.engine.EndCriteria
 
getMenuPanel() - Method in class fsmvis.gui.Viewer
Accessor method for the menu panel
getMinimum(int) - Method in class fsmvis.data.DataItemCollection
Returns the minimum value for a particular column, this will either be of type Integer, Double or Date.
getMinimums() - Method in class fsmvis.data.DataItemCollection
Returns the arraylist of the minimum values for each column in the data set.
getMinVelocity() - Method in class fsmvis.engine.EndCriteria
 
getModel() - Method in class fsmvis.gui.Viewer
Accessor method to the layout model
getModelType() - Method in class fsmvis.gui.Viewer
get the name of the layout model currently being used
getNames() - Static method in class fsmvis.ColorScales.ColorScales
 
getNumEpochs() - Static method in class fsmvis.gui.KMeansSettingsFrame
 
getNumFields() - Method in class fsmvis.data.DataItemCollection
Returns the number of fields in each of the records under analysis.
getNumIterations() - Method in class fsmvis.engine.SpringModel
Returns the number of iterations that have been carried out by this layout model
getNumIterations() - Method in interface fsmvis.engine.LayoutModel
Returns the number of iterations that have been carried out by this layout model
getOffsetX() - Method in class fsmvis.gui.ScatterPanel
Returns the x offset value
getOffsetY() - Method in class fsmvis.gui.ScatterPanel
Returns the y offset value
getOrigin() - Method in class fsmvis.gui.ScatterPanel
Returns the Point at the centre of the display, the origin
getPosition() - Method in class fsmvis.data.DataItem
Returns the current position coordinate of this data item
getPosition(int) - Method in class fsmvis.engine.SpringModel
Returns the coordinate position of the object corresponding to the index index
getPosition(int) - Method in interface fsmvis.engine.LayoutModel
Returns the coordinate position of the object corresponding to the index index
getProgress() - Method in interface fsmvis.utils.MonitorableTask
Returns the current progress through this task.
getProgress() - Method in class fsmvis.data.CSVLoader
Returns the current progress through this task.
getProperties() - Method in class fsmvis.engine.SpringModel
Returns the properties object used by a layout model
getProperties() - Method in interface fsmvis.engine.LayoutModel
Returns the properties object used by a layout model
getProperties() - Method in class fsmvis.utils.PropertiesHandler
returns the properties object generated by this class
getProperty(String) - Method in class fsmvis.utils.PropertiesHandler
 
getRectContents(Rectangle) - Method in class fsmvis.gui.ScatterPanel
Returns the indices of the data items that are contained inside the on screen rectangle rect.
getScale(String) - Static method in class fsmvis.ColorScales.ColorScales
 
getScaleX() - Method in class fsmvis.gui.ScatterPanel
Returns the current value of scale in the x direction
getScaleY() - Method in class fsmvis.gui.ScatterPanel
Returns the current value of scale in the y direction
getScatterControlPanel() - Method in class fsmvis.gui.Viewer
Accessor method for the scatter control panel
getScatterPanel() - Method in class fsmvis.gui.Viewer
Accessor method for the scatter panel
getSelected() - Method in class fsmvis.gui.SelectionHandler
returns the arrayList of selected states
getSelectedIndices() - Method in class fsmvis.gui.SelectionHandler
returns the selected indices, uses the hashset class because it guarantees constant time, add, remove and importantly contains.
getSelectedMaximum() - Method in class fsmvis.gui.DoubleSlider
Get the current selected maximum value
getSelectedMinimum() - Method in class fsmvis.gui.DoubleSlider
Get the current selected maximum value
getSelection() - Method in class fsmvis.gui.CheckBoxPanel
Returns the selection of this object
getSelection() - Method in class fsmvis.gui.ScatterPanel
Returns the selection of this object
getSelection() - Method in interface fsmvis.gui.Selectable
Returns the indices of the selected items in this object This method may return null if the getDeselection method is being used instead.
getSelection() - Method in class fsmvis.gui.DoubleSliderPanel
Returns the selection of this object
getSelection() - Method in class fsmvis.gui.SearchBoxPanel
Returns the indices of the selected items in this object This method may return null if the getDeselection method is being used instead.
getSelectionControlPanel() - Method in class fsmvis.gui.Viewer
Accessor method for the selection control panel
getSelectionHandler() - Method in class fsmvis.gui.Viewer
Accessor method for the selection handler
getSize() - Method in class fsmvis.data.DataItemCollection
Returns the size of this data item collection
getState(int) - Method in class fsmvis.gui.SelectionHandler
Returns the status of the data item located at index index.
getStress() - Method in class fsmvis.engine.SpringModel
Calculates stress
getToolTipLocation(MouseEvent) - Method in class fsmvis.gui.ScatterPanel
Sets the location that the tool tip should be displayed at
getToolTipText(MouseEvent) - Method in class fsmvis.gui.ScatterPanel
Sets the tool tip text to be displayed to be relative to the data element under the cursor
getTrackColor() - Method in class fsmvis.gui.DoubleSlider
Get the current color for the track
getTypes() - Method in class fsmvis.data.CSVLoader
Gets the types that correspond to the field names,
getTypes() - Method in class fsmvis.data.DataItemCollection
Returns the arrayList of types that this class contains
getTypes() - Method in interface fsmvis.data.DataLoader
Gets the types that correspond to the field names,
getUnrelatedDist() - Method in class fsmvis.data.DataItemCollection
Returns the distance after which two objects are considered to be unrelated.
getValues() - Method in class fsmvis.data.DataItem
Returns the collection of values that this DataItem contains
getVelocity() - Method in class fsmvis.data.DataItem
Returns the current velocity of this object
getW() - Method in class fsmvis.engine.Coordinate
Returns the w value
getX() - Method in class fsmvis.engine.Coordinate
Returns the x value
getY() - Method in class fsmvis.engine.Coordinate
Returns the y value
getZ() - Method in class fsmvis.engine.Coordinate
Returns the z value
GRAVITY_DAMPING_FORCE - Static variable in interface fsmvis.engine.LayoutModel
 
GRAVITY_FORCE - Static variable in interface fsmvis.engine.LayoutModel
 
gravityDampingForce - Static variable in class fsmvis.engine.SpringModel
 
gravityForce - Static variable in class fsmvis.engine.SpringModel
 
Gray - class fsmvis.ColorScales.Gray.
 
Gray() - Constructor for class fsmvis.ColorScales.Gray
 
group - Variable in class fsmvis.gui.SelectAlgorithmFrame
 

H

handleFile() - Method in class fsmvis.gui.FileHandlerFrame
Does the work of handling files.
handleFile() - Method in class fsmvis.gui.LayoutFileSaverFrame
Does the work of loading things.
handleFile() - Method in class fsmvis.gui.DataFileLoaderFrame
Does the work of loading things.
handleFile() - Method in class fsmvis.gui.LayoutFileLoaderFrame
Does the work of handling the file Overrides the method in fileHandlerFrame, loads a layout model object from disk.
handleFile() - Method in class fsmvis.gui.LayoutFileExporterFrame
Does the work of loading things.
handleSelection(Rectangle) - Method in class fsmvis.gui.ScatterPanel
Sets the currently selected indices of the scatter panel to be the indices of the data items held within rect
HeatedObject - class fsmvis.ColorScales.HeatedObject.
 
HeatedObject() - Constructor for class fsmvis.ColorScales.HeatedObject
 
height - Variable in class fsmvis.gui.ScatterPanel
 
help - Variable in class fsmvis.gui.MenuPanel
 
hideEndC(String) - Method in class fsmvis.gui.SelectAlgorithmFrame
 
hist - Variable in class fsmvis.gui.DoubleSliderPanel
 
HORIZONTAL - Static variable in class fsmvis.gui.DoubleSlider
Orientations
HORIZONTAL - Static variable in class fsmvis.gui.MiniHistogram
 

I

idfValues - Static variable in class fsmvis.data.DataItem
 
inBin(int, int) - Method in class fsmvis.gui.MiniHistogram
Returns whether or not the value at index in the data arraylist belongs in bin binNo
IndicesComparator - class fsmvis.gui.IndicesComparator.
 
IndicesComparator(ArrayList) - Constructor for class fsmvis.gui.IndicesComparator
constructor: takes an arraylist of values, the contents will be used to determine if indices are gt or lt or eq to each other.
info - Variable in class fsmvis.gui.Viewer
 
info - Variable in class fsmvis.gui.MenuPanel
 
InfoPanel - class fsmvis.gui.InfoPanel.
 
InfoPanel(Viewer) - Constructor for class fsmvis.gui.InfoPanel
constructor:
information - Variable in class fsmvis.gui.MenuPanel
 
informMessage(Component, String) - Static method in class fsmvis.gui.DialogBox
Send a standard swing message box to the user telling them of msg
init() - Method in class fsmvis.engine.SpringModel
Initalises the data structures needed for the spring model
initBins() - Method in class fsmvis.gui.MiniHistogram
Initialises all the bins (empties them)
initData() - Method in class fsmvis.gui.DoubleSliderPanel
initialises the data structures used to optimise the selection controls Creates an array of indices ordered in ascending order by their contents
INITIAL_DIMENSIONS - Static variable in class fsmvis.engine.Coordinate
 
initProperties() - Method in class fsmvis.gui.ScatterPanel
Initialises the properties associated with this object
initProperties() - Method in class fsmvis.data.CSVLoader
initialises the properties associated with this loader
initValues() - Method in class fsmvis.engine.SpringModel
intitialises the values held in the properties object
initValues() - Method in class fsmvis.engine.NeighbourAndSampleModel
Initialises the values for this class, over rides the method in Spring model.
INTEGER - Static variable in class fsmvis.data.DataItemCollection
 
INTEGER_NAME - Static variable in class fsmvis.data.CSVLoader
 
integrateChanges(int) - Method in class fsmvis.engine.SpringModel
Integrates the changes that have already been calculated.
interpModel - Variable in class fsmvis.gui.SelectAlgorithmFrame
 
isExtensionListInDescription() - Method in class fsmvis.gui.ExampleFileFilter
Returns whether the extension list (.jpg, .gif, etc) should show up in the human readable description.
isFinished() - Method in interface fsmvis.utils.MonitorableTask
Returns whether or not the current task has been completed
isFinished() - Method in class fsmvis.data.CSVLoader
Returns whether or not the current task has been completed
isNormalized - Variable in class fsmvis.data.DataItemCollection
 
isThisEnd(int, double) - Method in class fsmvis.engine.EndCriteria
 
isTrackingDrag() - Method in class fsmvis.gui.DoubleSlider
Check whether the user is currently dragging the slider.
itemStateChanged(ItemEvent) - Method in class fsmvis.gui.CheckBoxPanel
called when the state of an item has changed, required by ItemListener
itemStateChanged(ItemEvent) - Method in class fsmvis.gui.MenuPanel
called when the state of an item has changed, required by ItemListener
iterations - Variable in class fsmvis.gui.ScatterControlPanel
 
its - Variable in class fsmvis.gui.SelectAlgorithmFrame
 
its - Variable in class fsmvis.engine.EndCriteria
 

J

j - Variable in class fsmvis.gui.WindowHandler
 
justConstant - Variable in class fsmvis.gui.SelectAlgorithmFrame
 
justIterations - Variable in class fsmvis.gui.SelectAlgorithmFrame
 
justVelocity - Variable in class fsmvis.gui.SelectAlgorithmFrame
 

K

KeyListens - class fsmvis.gui.KeyListens.
 
KeyListens(KMeansSettingsFrame) - Constructor for class fsmvis.gui.KeyListens
 
keyPressed(KeyEvent) - Method in class fsmvis.gui.KeyListens
 
keyReleased(KeyEvent) - Method in class fsmvis.gui.KeyListens
 
KMEANS - Static variable in class fsmvis.data.DataItemCollection
 
KMeansSettingsFrame - class fsmvis.gui.KMeansSettingsFrame.
 

L

LAYOUT_BOUNDS - Static variable in interface fsmvis.engine.LayoutModel
 
layoutBounds - Static variable in class fsmvis.engine.SpringModel
 
layoutBounds - Variable in class fsmvis.data.DataItemCollection
 
LayoutFileExporterFrame - class fsmvis.gui.LayoutFileExporterFrame.
 
LayoutFileLoaderFrame - class fsmvis.gui.LayoutFileLoaderFrame.
 
LayoutFileSaverFrame - class fsmvis.gui.LayoutFileSaverFrame.
 
LayoutModel - interface fsmvis.engine.LayoutModel.
 
layoutSize - Variable in class fsmvis.gui.InfoPanel
 
LinGray - class fsmvis.ColorScales.LinGray.
 
LinGray() - Constructor for class fsmvis.ColorScales.LinGray
 
listeners - Variable in class fsmvis.gui.SelectionHandler
 
load - Variable in class fsmvis.gui.MenuPanel
 
loadModel(String) - Method in class fsmvis.gui.SelectAlgorithmFrame
 
loadProperties() - Method in class fsmvis.engine.SpringModel
Initialises the properties for this object to be the properties held for this object
loadProperties() - Method in class fsmvis.engine.NeighbourAndSampleModel
Initialises the properties for this object to be the properties held for this object
LOCS - class fsmvis.ColorScales.LOCS.
 
LOCS() - Constructor for class fsmvis.ColorScales.LOCS
 

M

Magenta - class fsmvis.ColorScales.Magenta.
 
Magenta() - Constructor for class fsmvis.ColorScales.Magenta
 
main - Variable in class fsmvis.gui.Viewer
 
main - Variable in class fsmvis.gui.SelectAlgorithmFrame
 
mapping - Variable in class fsmvis.gui.CheckBoxPanel
 
max - Variable in class fsmvis.gui.MiniHistogram
 
MAX_CHECKBOXES - Static variable in class fsmvis.gui.SelectionControlPanel
 
MAX_DELAY - Static variable in class fsmvis.gui.ScatterPanel
 
maxBinHeight - Variable in class fsmvis.gui.MiniHistogram
 
maxDate - Variable in class fsmvis.gui.MiniHistogram
 
maxDbl - Variable in class fsmvis.gui.MiniHistogram
 
maxDist - Variable in class fsmvis.data.DataItemCollection
 
maximums - Variable in class fsmvis.data.DataItemCollection
 
maxInt - Variable in class fsmvis.gui.MiniHistogram
 
me - Variable in class fsmvis.gui.ProgressBarFrame
 
me - Variable in class fsmvis.gui.ScatterPanel
 
me - Variable in class fsmvis.gui.InfoPanel
 
mean - Variable in class fsmvis.data.DataItemCollection
 
menu - Variable in class fsmvis.gui.Viewer
 
menuBar - Variable in class fsmvis.gui.MenuPanel
 
MenuPanel - class fsmvis.gui.MenuPanel.
 
MenuPanel(Viewer) - Constructor for class fsmvis.gui.MenuPanel
 
min - Variable in class fsmvis.gui.MiniHistogram
 
minDate - Variable in class fsmvis.gui.MiniHistogram
 
minDbl - Variable in class fsmvis.gui.MiniHistogram
 
minDist - Variable in class fsmvis.data.DataItemCollection
 
MiniHistogram - class fsmvis.gui.MiniHistogram.
 
MiniHistogram(Viewer, ArrayList, Object, Object) - Constructor for class fsmvis.gui.MiniHistogram
constructor: takes an arrayList of data which must contain Integer objects.
MiniHistogram(Viewer, ArrayList, Object, Object, int) - Constructor for class fsmvis.gui.MiniHistogram
constructor: takes an arrayList of data which must contain Integer objects.
minimums - Variable in class fsmvis.data.DataItemCollection
 
minInt - Variable in class fsmvis.gui.MiniHistogram
 
model - Variable in class fsmvis.gui.ScatterPanel
 
model - Variable in class fsmvis.gui.Viewer
 
modelType - Variable in class fsmvis.gui.Viewer
 
MonitorableTask - interface fsmvis.utils.MonitorableTask.
 
mouse - Variable in class fsmvis.gui.ScatterPanel
 
mouseClicked(MouseEvent) - Method in class fsmvis.gui.MouseHandler
 
mouseDragged(MouseEvent) - Method in class fsmvis.gui.MouseHandler
Method that is called whenever the mouse is dragged, that is, has a button held down and is moved
MouseHandler - class fsmvis.gui.MouseHandler.
 
MouseHandler(ScatterPanel) - Constructor for class fsmvis.gui.MouseHandler
constructor:
mousePressed(MouseEvent) - Method in class fsmvis.gui.MouseHandler
 
mouseReleased(MouseEvent) - Method in class fsmvis.gui.MouseHandler
 
msg - Variable in class fsmvis.gui.ProgressBarFrame
 

N

N - Variable in class fsmvis.engine.EndCriteria
 
neighbModel - Variable in class fsmvis.gui.SelectAlgorithmFrame
 
NEIGHBOUR_SIZE - Static variable in class fsmvis.engine.NeighbourAndSampleModel
 
NeighbourAndSampleModel - class fsmvis.engine.NeighbourAndSampleModel.
 
NeighbourAndSampleModel(DataItemCollection, EndCriteria, Viewer) - Constructor for class fsmvis.engine.NeighbourAndSampleModel
constructor: takes a DataItemCollection as argument, this is the data that will be used with this layout model
NeighbourAndSampleModel(DataItemCollection, EndCriteria, Viewer, int, int) - Constructor for class fsmvis.engine.NeighbourAndSampleModel
constructor: takes a DataItemCollection as argument, this is the data that will be used with this layout model
NeighbourComparator - class fsmvis.engine.NeighbourComparator.
 
NeighbourComparator(DataItemCollection, int) - Constructor for class fsmvis.engine.NeighbourComparator
constructor: takes the dataItemCollection that contain the desired distances, and the index that this is the neighbour list of
neighbours - Variable in class fsmvis.engine.NeighbourAndSampleModel
 
neighbourSize - Static variable in class fsmvis.engine.NeighbourAndSampleModel
 
newLayout - Variable in class fsmvis.gui.MenuPanel
 
newThread() - Method in class fsmvis.gui.ScatterPanel
 
NO_FILE - Static variable in class fsmvis.utils.NoPropertiesException
 
NO_KMEANS - Static variable in class fsmvis.data.DataItemCollection
 
NO_PROPERTY - Static variable in class fsmvis.utils.NoPropertiesException
 
nonStop - Variable in class fsmvis.engine.EndCriteria
 
NoPropertiesException - exception fsmvis.utils.NoPropertiesException.
 
NoPropertiesException() - Constructor for class fsmvis.utils.NoPropertiesException
constructor: creates a new empty exception with no message
NoPropertiesException(String) - Constructor for class fsmvis.utils.NoPropertiesException
Creates a new NoPropertiesException object with the message msg
normalise - Variable in class fsmvis.gui.SelectAlgorithmFrame
 
normalising - Variable in class fsmvis.data.DataItemCollection
 
normalizeDesiredDists(double) - Method in class fsmvis.data.DataItemCollection
Normalizes the desired distance data to be within layoutBounds, does this by normalizing by STANDARD_DEVS standard deviations.
normalizeVector() - Method in class fsmvis.engine.Vect
Makes a new normalized version of this vector.
normGroup - Variable in class fsmvis.gui.SelectAlgorithmFrame
 
notFirst - Variable in class fsmvis.gui.ScatterPanel
 
notifyListeners() - Method in class fsmvis.gui.SelectionHandler
Method to be called whenever a change occurs in the selection, notifies all the listeners of this.
numBins - Variable in class fsmvis.gui.MiniHistogram
 
numDataItems - Variable in class fsmvis.data.CSVLoader
 
numIterations - Variable in class fsmvis.engine.SpringModel
 

O

OCS - class fsmvis.ColorScales.OCS.
 
OCS() - Constructor for class fsmvis.ColorScales.OCS
 
offsetX - Variable in class fsmvis.gui.ScatterPanel
 
offsetY - Variable in class fsmvis.gui.ScatterPanel
 
ok - Variable in class fsmvis.gui.FileHandlerFrame
 
ok - Variable in class fsmvis.gui.SelectAlgorithmFrame
 
oldMax - Variable in class fsmvis.gui.DoubleSliderPanel
 
oldMin - Variable in class fsmvis.gui.DoubleSliderPanel
 
ORD_FACTOR - Variable in class fsmvis.data.DataItemCollection
 
ORD_FACTOR - Variable in class fsmvis.data.DataItem
 
orientation - Variable in class fsmvis.gui.MiniHistogram
 
origin - Variable in class fsmvis.gui.ScatterPanel
 
overSubmenu - Variable in class fsmvis.gui.MenuPanel
 

P

paint(Graphics) - Method in class fsmvis.gui.ScatterPanel
Overrides the standard paint method, displays all the dots onto the screen
paint(Graphics) - Method in class fsmvis.gui.MiniHistogram
Overrides the paint method of JComponent
parent - Variable in class fsmvis.gui.MouseHandler
 
parent - Variable in class fsmvis.gui.FileHandlerFrame
 
parent - Variable in class fsmvis.gui.CheckBoxPanel
 
parent - Variable in class fsmvis.gui.ScatterControlPanel
 
parent - Variable in class fsmvis.gui.ScatterPanel
 
parent - Variable in class fsmvis.gui.MenuPanel
 
parent - Variable in class fsmvis.gui.InfoPanel
 
parent - Variable in class fsmvis.gui.DoubleSliderPanel
 
parent - Variable in class fsmvis.gui.SelectionControlPanel
 
parent - Variable in class fsmvis.gui.SelectAlgorithmFrame
 
parent - Variable in class fsmvis.gui.EngineControlPanel
 
parent - Variable in class fsmvis.gui.SearchBoxPanel
 
parent - Variable in class fsmvis.gui.MiniHistogram
 
parent - Variable in class fsmvis.data.CSVLoader
 
parseDataItem(String) - Method in class fsmvis.data.CSVLoader
Method to parse a data item, turns the String of fields in the data item into a dataItem object.
parseDataItem(String) - Method in interface fsmvis.data.DataLoader
Method to parse a data item, turns the String of fields in the data item into a dataItem object.
pause() - Method in class fsmvis.gui.ScatterPanel
Pauses the layout model
paused - Variable in class fsmvis.gui.ScatterPanel
 
performQuery(List, String) - Method in class fsmvis.gui.SearchBoxPanel
Peforms the query by searching for the val string in the arraylist col
point10 - Static variable in class fsmvis.gui.Viewer
 
point11 - Static variable in class fsmvis.gui.Viewer
 
point8 - Static variable in class fsmvis.gui.Viewer
 
point9 - Static variable in class fsmvis.gui.Viewer
 
position - Variable in class fsmvis.engine.SpringModel
 
position - Variable in class fsmvis.data.DataItem
 
progress - Variable in class fsmvis.data.CSVLoader
 
progressBar - Variable in class fsmvis.gui.ProgressBarFrame
 
ProgressBarFrame - class fsmvis.gui.ProgressBarFrame.
 
ProgressBarFrame(MonitorableTask, String) - Constructor for class fsmvis.gui.ProgressBarFrame
 
prop - Variable in class fsmvis.utils.PropertiesHandler
 
properties - Variable in class fsmvis.gui.ScatterPanel
 
properties - Variable in class fsmvis.engine.SpringModel
 
properties - Variable in class fsmvis.data.CSVLoader
 
PropertiesHandler - class fsmvis.utils.PropertiesHandler.
 
PropertiesHandler(Object) - Constructor for class fsmvis.utils.PropertiesHandler
 
PropertiesHandler(Object, String) - Constructor for class fsmvis.utils.PropertiesHandler
 
PropertiesHandler(String) - Constructor for class fsmvis.utils.PropertiesHandler
constructor:

Q

query - Variable in class fsmvis.gui.SearchBoxPanel
 
quit - Variable in class fsmvis.gui.MenuPanel
 

R

Rainbow - class fsmvis.ColorScales.Rainbow.
 
Rainbow() - Constructor for class fsmvis.ColorScales.Rainbow
 
randomizePositions() - Method in class fsmvis.engine.SpringModel
randomizes the starting locations of the data set.
randomizeSample(int) - Method in class fsmvis.engine.NeighbourAndSampleModel
Creates a new arrayList of random numbers to be used by the samples ArrayList.
randomizeSample(int, String) - Method in class fsmvis.engine.NeighbourAndSampleModel
To ensure this version runs for final iterations of interp model - should run on whole set, rather than version in SubsetNeighb+Samp
RANGE_HI - Static variable in interface fsmvis.engine.LayoutModel
 
RANGE_LO - Static variable in interface fsmvis.engine.LayoutModel
 
rangeHi - Static variable in class fsmvis.engine.SpringModel
 
rangeLo - Static variable in class fsmvis.engine.SpringModel
 
readData() - Method in class fsmvis.data.CSVLoader
Reads from the data source and parses its contents to create a DataItemCollection
readData() - Method in interface fsmvis.data.DataLoader
Reads from the data source and parses its contents to create a DataItemCollection
readFields() - Method in class fsmvis.data.CSVLoader
Reads the field names from the first line of the csv file Assumes the input pointer is ready at the start of the file
readTypes() - Method in class fsmvis.data.CSVLoader
Reads the corresponding types from the second line of csv file Assumes the input pointer is at the start of the second line of the csv file.
rec - Variable in class fsmvis.gui.ScatterPanel
 
rect - Variable in class fsmvis.gui.MouseHandler
 
refresh() - Method in class fsmvis.data.DataItemCollection
Called when deserialized, refreshes any data item values which were not stored with serialization.
removeAdjustmentListener(DoubleSliderAdjustmentListener) - Method in class fsmvis.gui.DoubleSlider
Remove the given DoubleSliderAdjustmentListener from the list of event listeners
removeFromSelected(List) - Method in class fsmvis.gui.SelectionHandler
Removes the indices specified in newDeselect from the currently selected indices.
removeFromSelection(Rectangle) - Method in class fsmvis.gui.ScatterPanel
Removes all the data items which are within the on screen rectangle rect from the currently selected indices that this object holds
removeSelectableObject(Selectable) - Method in class fsmvis.gui.SelectionHandler
 
removeSelectionChangedListener(SelectionChangedListener) - Method in class fsmvis.gui.SelectionHandler
Removes a selection changed listener
reset - Variable in class fsmvis.gui.MenuPanel
 
reset() - Method in class fsmvis.gui.ScatterPanel
resets the scale and offset values to their original values.
reset() - Method in class fsmvis.gui.InfoPanel
Resets the timers
reset() - Method in class fsmvis.gui.DoubleSliderPanel
resets the sliders to their inital positions and selections
resetIterations() - Method in class fsmvis.engine.SpringModel
reset iterations
rgb - Static variable in class fsmvis.ColorScales.LinGray
 
rgb - Static variable in class fsmvis.ColorScales.BTC
 
rgb - Static variable in class fsmvis.ColorScales.HeatedObject
 
rgb - Static variable in class fsmvis.ColorScales.Magenta
 
rgb - Static variable in class fsmvis.ColorScales.Gray
 
rgb - Static variable in class fsmvis.ColorScales.BTY
 
rgb - Static variable in class fsmvis.ColorScales.LOCS
 
rgb - Static variable in class fsmvis.ColorScales.OCS
 
rgb - Static variable in class fsmvis.ColorScales.Rainbow
 
run() - Method in class fsmvis.gui.ProgressBarFrame
 
run() - Method in class fsmvis.gui.ScatterPanel
run method defined by runnable interface
run() - Method in class fsmvis.gui.InfoPanel
Code to be executed by this classes thread
running - Variable in class fsmvis.gui.ScatterPanel
 
running - Variable in class fsmvis.gui.InfoPanel
 
runningTime - Variable in class fsmvis.gui.InfoPanel
 
runningTime - Variable in class fsmvis.engine.SpringModel
 

S

SAMPLE_SIZE - Static variable in class fsmvis.engine.NeighbourAndSampleModel
 
samples - Variable in class fsmvis.engine.NeighbourAndSampleModel
 
sampleSize - Static variable in class fsmvis.engine.NeighbourAndSampleModel
 
save - Variable in class fsmvis.gui.MenuPanel
 
scale(double) - Method in class fsmvis.engine.Vect
Scales this vector by multiplying by a factor
scaleX - Variable in class fsmvis.gui.ScatterPanel
 
scaleY - Variable in class fsmvis.gui.ScatterPanel
 
scatControl - Variable in class fsmvis.gui.Viewer
 
scatter - Variable in class fsmvis.gui.Viewer
 
ScatterControlPanel - class fsmvis.gui.ScatterControlPanel.
 
ScatterControlPanel(Viewer) - Constructor for class fsmvis.gui.ScatterControlPanel
constructor: creates a new ScatterControlPanel
ScatterPanel - class fsmvis.gui.ScatterPanel.
 
ScatterPanel(LayoutModel) - Constructor for class fsmvis.gui.ScatterPanel
 
ScatterPanel(LayoutModel, Viewer) - Constructor for class fsmvis.gui.ScatterPanel
 
schemeSubmenu - Variable in class fsmvis.gui.MenuPanel
 
scroll - Variable in class fsmvis.gui.SelectionControlPanel
 
scrollPanel - Variable in class fsmvis.gui.SelectionControlPanel
 
SearchBoxPanel - class fsmvis.gui.SearchBoxPanel.
 
SearchBoxPanel(Viewer, DataItemCollection, int) - Constructor for class fsmvis.gui.SearchBoxPanel
constructor:
searches - Variable in class fsmvis.gui.SelectionControlPanel
 
select - Variable in class fsmvis.gui.SearchBoxPanel
 
Selectable - interface fsmvis.gui.Selectable.
 
selectables - Variable in class fsmvis.gui.SelectionHandler
 
SelectAlgorithmFrame - class fsmvis.gui.SelectAlgorithmFrame.
 
SelectAlgorithmFrame(DataItemCollection, Viewer) - Constructor for class fsmvis.gui.SelectAlgorithmFrame
constructor: takes the dataItemCollection as input so that it can hand it over to the correct layout algorithm
selectAll() - Method in class fsmvis.gui.CheckBoxPanel
Sets this selectable object to select all its items
selectAll() - Method in class fsmvis.gui.ScatterPanel
Sets this selectable object to select all its items
selectAll() - Method in class fsmvis.gui.SelectionHandler
Selects all of the items in the selection.
selectAll() - Method in interface fsmvis.gui.Selectable
Sets this selectable object to select all its items
selectAll() - Method in class fsmvis.gui.DoubleSliderPanel
Sets this selectable object to select all its items
selectAll() - Method in class fsmvis.gui.SearchBoxPanel
Sets this selectable object to select all its items
selectControl - Variable in class fsmvis.gui.Viewer
 
selected - Variable in class fsmvis.gui.CheckBoxPanel
 
selected - Variable in class fsmvis.gui.ScatterPanel
 
selected - Variable in class fsmvis.gui.SelectionHandler
 
selected - Variable in class fsmvis.gui.DoubleSliderPanel
 
selectedCol - Variable in class fsmvis.gui.ScatterPanel
 
selectedIndices - Variable in class fsmvis.gui.SelectionHandler
 
selection - Variable in class fsmvis.gui.ScatterPanel
 
selectionChanged(SelectionHandler) - Method in class fsmvis.gui.CheckBoxPanel
Method that will be called the selection is changed in the selection handler
selectionChanged(SelectionHandler) - Method in class fsmvis.gui.ScatterPanel
Method that will be called the selection is changed in the selection handler
selectionChanged(SelectionHandler) - Method in interface fsmvis.gui.SelectionChangedListener
Method that will be called the selection is changed in the selection handler
selectionChanged(SelectionHandler) - Method in class fsmvis.gui.MiniHistogram
Method that will be called the selection is changed in the selection handler
SelectionChangedListener - interface fsmvis.gui.SelectionChangedListener.
 
SelectionControlPanel - class fsmvis.gui.SelectionControlPanel.
 
SelectionControlPanel(Viewer) - Constructor for class fsmvis.gui.SelectionControlPanel
constructor:
selectionHandler - Variable in class fsmvis.gui.Viewer
 
SelectionHandler - class fsmvis.gui.SelectionHandler.
 
SelectionHandler() - Constructor for class fsmvis.gui.SelectionHandler
constructor: Creates a new emepty Selection handler with an initial size of 0
SelectionHandler(int) - Constructor for class fsmvis.gui.SelectionHandler
constructor: Creates a new selection handler that can initially handle up to size elements
selectNone() - Method in class fsmvis.gui.CheckBoxPanel
Sets this selectable item to select none of it items
selectNone() - Method in class fsmvis.gui.ScatterPanel
Sets this selectable item to select none of it items
selectNone() - Method in class fsmvis.gui.SelectionHandler
Selects none of the items, deselects all
selectNone() - Method in interface fsmvis.gui.Selectable
Sets this selectable item to select none of it items
selectNone() - Method in class fsmvis.gui.DoubleSliderPanel
Sets this selectable item to select none of it items
selectNone() - Method in class fsmvis.gui.SearchBoxPanel
Sets this selectable item to select none of it items
set(Coordinate) - Method in class fsmvis.engine.Coordinate
 
set(double, double, double, double) - Method in class fsmvis.engine.Coordinate
Sets the values of the coordinates
set(int, double) - Method in class fsmvis.engine.Coordinate
 
setAbsoluteMaximum(double) - Method in class fsmvis.gui.DoubleSlider
Set the maximum possible value
setAbsoluteMinimum(double) - Method in class fsmvis.gui.DoubleSlider
Set the minimum possible value
setAbsoluteRange(double, double) - Method in class fsmvis.gui.DoubleSlider
Set the maximum possible range
setActiveDimensions(int) - Static method in class fsmvis.engine.Coordinate
A static method to set the number of active dimensions, must be between 0 and INITIAL_DIMENSIONS
setAllStates(boolean) - Method in class fsmvis.gui.SelectionHandler
sets all of the states to the state indicated by the parameter, this can be used to select all items or to deselect all items
setAnimate(boolean) - Method in class fsmvis.gui.ScatterPanel
 
setAnimateState(boolean) - Method in class fsmvis.gui.MenuPanel
Accessor method to set the state of the animate checkbox item
setColor(Color) - Method in class fsmvis.data.DataItem
Sets the color of this data item
setColorField(String) - Method in class fsmvis.gui.ScatterPanel
 
setColorScheme(String) - Method in class fsmvis.gui.ScatterPanel
Sets the color scheme for the scatter panel to use
setDamping(double) - Method in class fsmvis.gui.EngineControlPanel
 
setDataItemCollection(DataItemCollection) - Method in class fsmvis.engine.SpringModel
Accessor method for the dataItems object
setDataSize(int) - Method in class fsmvis.gui.InfoPanel
Accessor method to set the data size text field
setDelay(long) - Method in class fsmvis.gui.ScatterPanel
Sets the delay between calls to do runIteration
setDescription(String) - Method in class fsmvis.gui.ExampleFileFilter
Sets the human readable description of this filter.
setDrawTrails(boolean) - Method in class fsmvis.gui.ScatterPanel
Sets whether or not the scatter panel should draw trails on the data items
setEnabled(boolean) - Method in class fsmvis.gui.MenuPanel
called when the menu panel is to be disabled over enabled, modifies how some menu item are displayed, causes the save item to be enabled and the overSubmenu to be generated.
setEnabled(boolean) - Method in class fsmvis.gui.InfoPanel
Sets the state of this panel to be the boolean state
setError(double) - Method in class fsmvis.gui.InfoPanel
Accessor method to set the average error text field
setExtensionListInDescription(boolean) - Method in class fsmvis.gui.ExampleFileFilter
Determines whether the extension list (.jpg, .gif, etc) should show up in the human readable description.
setFields(ArrayList) - Method in class fsmvis.data.DataItemCollection
Sets the fields that this collection represents to be fields
setForce(Vect) - Method in class fsmvis.data.DataItem
Sets the forces associated with this object to be force
setFreeness(double) - Method in class fsmvis.gui.EngineControlPanel
 
setHilitedMaximum(double) - Method in class fsmvis.gui.DoubleSlider
Set the maximum hilited value
setHilitedMinimum(double) - Method in class fsmvis.gui.DoubleSlider
Set the minimum hilited value
setHilitedRange(double, double) - Method in class fsmvis.gui.DoubleSlider
Set the hilited range
setHiliteVisible(boolean) - Method in class fsmvis.gui.DoubleSlider
Set the marking status of the hilited range
setIterations(int) - Method in class fsmvis.gui.ScatterControlPanel
Sets the number of iterations that have been performed and updates the text field
setIterations(String) - Method in class fsmvis.gui.KMeansSettingsFrame
 
setLayoutSize(int) - Method in class fsmvis.gui.InfoPanel
Accessor method to set the layout size text field
setModel(LayoutModel) - Method in class fsmvis.gui.ScatterPanel
called when the layout model that is being used has changed
setModel(LayoutModel, String) - Method in class fsmvis.gui.Viewer
 
setN(int) - Method in class fsmvis.engine.EndCriteria
 
setNearestCentroidType() - Static method in class fsmvis.gui.KMeansSettingsFrame
 
setNormalizeData(double[], double[]) - Method in class fsmvis.data.DataItemCollection
Sets the values used for data normalization, the arrays contain values for each column in the data set, which contains numeric data.
setNormalizeData(double[], double[], double) - Static method in class fsmvis.data.DataItem
sets up the normalization data that all data item will use
setOffsetX(double) - Method in class fsmvis.gui.ScatterPanel
sets the x offset value
setOffsetY(double) - Method in class fsmvis.gui.ScatterPanel
sets the y offset value
setPosition(Coordinate) - Method in class fsmvis.data.DataItem
Sets the layout position for this object to be the point
setRect(Rectangle) - Method in class fsmvis.gui.ScatterPanel
Stores the last drawn rectangle
setRunningTime(long) - Method in class fsmvis.gui.InfoPanel
Accessor method to set the Running time field
setScale(double, double) - Method in class fsmvis.gui.ScatterPanel
Sets the scale to be the new value scale
setScaleX(double) - Method in class fsmvis.gui.ScatterPanel
Sets the x scale to be the new value scale
setScaleY(double) - Method in class fsmvis.gui.ScatterPanel
Sets the y scale to be the new value scale
setSelectedColumn(String) - Method in class fsmvis.gui.ScatterPanel
Sets the selected column value, this is used for the tooltips to give a value
setSelectedMaximum(double) - Method in class fsmvis.gui.DoubleSlider
Set the maximum selected value
setSelectedMinimum(double) - Method in class fsmvis.gui.DoubleSlider
Set the minimum selected value
setSelectedRange(double, double) - Method in class fsmvis.gui.DoubleSlider
Set the selected range
setSizes(int, int) - Method in class fsmvis.engine.NeighbourAndSampleModel
 
setSpring(double) - Method in class fsmvis.gui.EngineControlPanel
 
setStates(List, boolean) - Method in class fsmvis.gui.SelectionHandler
Sets the states of the indices stored in indices to be state, internal method used by removefrom selected and add to selected.
setTrackColor(Color) - Method in class fsmvis.gui.DoubleSlider
Set the current color for the track
setTrackNotificationThrottle(long) - Method in class fsmvis.gui.DoubleSlider
Set the time interval between consecutive DoubleSliderAdjustmentListener notifications whilst tracking a drag.
setTypes(ArrayList) - Method in class fsmvis.data.DataItemCollection
Sets the types that this collection represents to be types
setValues(double, double, double, double) - Method in class fsmvis.gui.DoubleSlider
Set the maximum possible range and selected range all together
setVelocity(double) - Method in class fsmvis.gui.InfoPanel
Accessor method to set the average velocity text field
setVelocity(Vect) - Method in class fsmvis.data.DataItem
Sets the velocity of this object to be the new value velocity
setW(double) - Method in class fsmvis.engine.Coordinate
Sets the w value
setX(double) - Method in class fsmvis.engine.Coordinate
Sets the x value
setY(double) - Method in class fsmvis.engine.Coordinate
Sets the y value
setZ(double) - Method in class fsmvis.engine.Coordinate
Sets the z value
sig - Variable in class fsmvis.data.DataItemCollection
 
sigma - Variable in class fsmvis.data.DataItemCollection
 
sigma - Static variable in class fsmvis.data.DataItem
 
sigma() - Static method in class fsmvis.data.DataItem
 
size - Variable in class fsmvis.gui.SelectionHandler
 
size - Variable in class fsmvis.data.DataItemCollection
 
slider - Variable in class fsmvis.gui.DoubleSliderPanel
 
SLIDER_MAX - Variable in class fsmvis.gui.EngineControlPanel
 
sliders - Variable in class fsmvis.gui.SelectionControlPanel
 
sortedIndices - Variable in class fsmvis.gui.DoubleSliderPanel
 
speed - Variable in class fsmvis.gui.ScatterControlPanel
 
spring - Variable in class fsmvis.gui.EngineControlPanel
 
SPRING_FORCE - Static variable in interface fsmvis.engine.LayoutModel
 
springForce - Static variable in class fsmvis.engine.SpringModel
 
springModel - Variable in class fsmvis.gui.SelectAlgorithmFrame
 
SpringModel - class fsmvis.engine.SpringModel.
 
SpringModel(DataItemCollection, EndCriteria, Viewer) - Constructor for class fsmvis.engine.SpringModel
constructor:
STANDARD_DEVS - Variable in class fsmvis.data.DataItemCollection
 
start - Variable in class fsmvis.gui.ScatterControlPanel
 
start() - Method in class fsmvis.gui.ScatterPanel
starts the layout model
start() - Method in class fsmvis.gui.InfoPanel
Called when the layout algorithm is started, starts the timer in this thread
startTime - Variable in class fsmvis.engine.SpringModel
 
stateChanged(ChangeEvent) - Method in class fsmvis.gui.ScatterControlPanel
Called whenever the state of the slider is changed, required by change listener.
stateChanged(ChangeEvent) - Method in class fsmvis.gui.EngineControlPanel
Called whenever the state of the slider is changed, required by change listener.
stdDevs - Static variable in class fsmvis.data.DataItem
 
stdDevs() - Static method in class fsmvis.data.DataItem
 
stop - Variable in class fsmvis.gui.ScatterControlPanel
 
stop() - Method in class fsmvis.gui.InfoPanel
Called when the layout algorithm is stopped, stops the timer in this thread
stress - Variable in class fsmvis.gui.InfoPanel
 
STRING - Static variable in class fsmvis.data.DataItemCollection
 
STRING_NAME - Static variable in class fsmvis.data.CSVLoader
 
sub(Vect) - Method in class fsmvis.engine.Coordinate
subtracts the components of the vector v from this coordinate
sumHDSquares - Variable in class fsmvis.data.DataItemCollection
 
sumHDVals - Variable in class fsmvis.data.DataItemCollection
 
sumOfSquares - Variable in class fsmvis.data.CSVLoader
 
sumOfSquares - Variable in class fsmvis.data.DataItemCollection
 
sumOfVals - Variable in class fsmvis.data.CSVLoader
 
sumOfVals - Variable in class fsmvis.data.DataItemCollection
 

T

task - Variable in class fsmvis.gui.ProgressBarFrame
 
taskLength - Variable in class fsmvis.data.CSVLoader
 
threadRunning(boolean) - Method in class fsmvis.gui.ScatterPanel
 
TIME_DAMPING_FORCE - Static variable in interface fsmvis.engine.LayoutModel
 
TIME_FORCE - Static variable in interface fsmvis.engine.LayoutModel
 
timeDampingForce - Static variable in class fsmvis.engine.SpringModel
 
timeForce - Static variable in class fsmvis.engine.SpringModel
 
timer - Variable in class fsmvis.gui.ProgressBarFrame
 
TooManyIterationsException - exception fsmvis.engine.TooManyIterationsException.
 
TooManyIterationsException() - Constructor for class fsmvis.engine.TooManyIterationsException
 
TooManyIterationsException(String) - Constructor for class fsmvis.engine.TooManyIterationsException
 
toString() - Method in class fsmvis.gui.CheckBoxPanel
Returns the name of the column that this check box panel represents
toString() - Method in class fsmvis.gui.DoubleSliderPanel
Overrides the parent method, returns the column name which this double slider panel is representing
toString() - Method in class fsmvis.gui.SearchBoxPanel
Returns the string that repesents the name of the column that this data represents
toString() - Method in class fsmvis.engine.Coordinate
Turns the object into a String representation
TRAIL_COLOR - Static variable in class fsmvis.gui.ScatterPanel
 
TRAIL_DOT_SIZE - Static variable in class fsmvis.gui.ScatterPanel
 
TRAIL_LENGTH - Static variable in class fsmvis.gui.ScatterPanel
 
trails - Variable in class fsmvis.gui.ScatterPanel
 
turnOff() - Method in class fsmvis.engine.EndCriteria
Option to disregard end criteria.
types - Variable in class fsmvis.data.CSVLoader
 
types - Variable in class fsmvis.data.DataItemCollection
 

U

undef - Variable in class fsmvis.data.CSVLoader
 
UNDEFINED_FORMAT - Static variable in class fsmvis.data.CSVLoader
 
unrelatedDist - Variable in class fsmvis.engine.SpringModel
 
unrelatedDist - Variable in class fsmvis.data.DataItemCollection
 
update() - Method in class fsmvis.gui.ScatterPanel
Method that should be called whenever an screen update is required,
update() - Method in class fsmvis.gui.KMeansSettingsFrame
 
update(DataItemCollection) - Method in class fsmvis.gui.SelectionControlPanel
Reloads the JPanel and figures out what sliders and stuff to put on it based on the contents of the data item collection
updateSelection() - Method in class fsmvis.gui.SelectionHandler
method to be called by a selectable object when the selection has changed.
updateTrails() - Method in class fsmvis.gui.ScatterPanel
updates the contents of the trails information.
updateValues() - Method in class fsmvis.engine.SpringModel
called whenever the values for this layout model have been altered externally, so that the system knows to update their values
updateValues() - Method in interface fsmvis.engine.LayoutModel
called whenever the values for this layout model have been altered externally, so that the system knows to update their values
useSamples - Variable in class fsmvis.data.DataItemCollection
 
Utils - class fsmvis.utils.Utils.
 
Utils() - Constructor for class fsmvis.utils.Utils
 

V

values - Variable in class fsmvis.data.DataItem
 
Vect - class fsmvis.engine.Vect.
 
Vect() - Constructor for class fsmvis.engine.Vect
constructor: empty
Vect(Coordinate) - Constructor for class fsmvis.engine.Vect
constructor: instantiates the class with an existing coordinate, treats The values of the coordinate as if they were vectors
Vect(Coordinate, Coordinate) - Constructor for class fsmvis.engine.Vect
constructor: Takes two Coordinate objects as parameters and constructs a vector from this
Vect(double, double, double, double) - Constructor for class fsmvis.engine.Vect
constructor: takes four values to use as vector values
vel - Variable in class fsmvis.gui.SelectAlgorithmFrame
 
vel - Variable in class fsmvis.engine.EndCriteria
 
velocity - Variable in class fsmvis.gui.InfoPanel
 
velocity - Variable in class fsmvis.engine.SpringModel
 
velocity - Variable in class fsmvis.data.DataItem
 
VERTICAL - Static variable in class fsmvis.gui.DoubleSlider
Orientations
VERTICAL - Static variable in class fsmvis.gui.MiniHistogram
 
view - Variable in class fsmvis.gui.MenuPanel
 
Viewer - class fsmvis.gui.Viewer.
 
Viewer(LayoutModel) - Constructor for class fsmvis.gui.Viewer
constructor: Creates a new Viewer using the specified layout model
viewParent - Variable in class fsmvis.engine.SpringModel
 

W

w - Variable in class fsmvis.engine.Coordinate
 
width - Variable in class fsmvis.gui.ScatterPanel
 
windowClosing(WindowEvent) - Method in class fsmvis.gui.WindowHandler
 
windowClosing(WindowEvent) - Method in class fsmvis.gui.ExitingWindowHandler
 
WindowHandler - class fsmvis.gui.WindowHandler.
 
WindowHandler(JFrame) - Constructor for class fsmvis.gui.WindowHandler
 
WriteCSV - Variable in class fsmvis.data.CSVOut
 
writeDistanceToFile(double) - Method in class fsmvis.data.CSVOut
 
writeStressToFile(double, long, boolean) - Method in class fsmvis.data.CSVOut
 

X

x - Variable in class fsmvis.engine.Coordinate
 

Y

y - Variable in class fsmvis.engine.Coordinate
 

Z

z - Variable in class fsmvis.engine.Coordinate
 

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